chore: Bump LLM max_tokens to 32768, commit M002/M003 GSD artifacts

- max_tokens bumped from 16384 to 32768 (extraction responses still hitting limits)
- All GSD planning/completion artifacts for M002 (deployment) and M003 (DNS + LLM routing)
- KNOWLEDGE.md updated with XPLTD domain setup flow and container healthcheck patterns
- DECISIONS.md updated with D015 (subnet) and D016 (Ollama for embeddings)

.env.example

@@ -30,7 +30,7 @@ LLM_FALLBACK_MODEL=fyn-qwen35-chat
 #LLM_STAGE5_MODALITY=thinking
 
 # Max tokens for LLM responses (OpenWebUI defaults to 1000 — pipeline needs much more)
-LLM_MAX_TOKENS=16384
+LLM_MAX_TOKENS=32768
 
 # Embedding endpoint (Ollama container in the compose stack)
 EMBEDDING_API_URL=http://chrysopedia-ollama:11434/v1

.gsd/DECISIONS.md

@@ -20,3 +20,5 @@
 | D012 | M001/S05 | requirement | R007 Creators Browse Page status | validated | CreatorsBrowse.tsx implements genre filter pills, type-to-narrow name filter, sort toggle (Random default/A-Z/Views). Each creator row shows name, genre tags, technique_count, video_count. Links to CreatorDetail page. Backend GET /api/v1/creators supports sort=random\|alpha\|views and genre filter. Integration tests verify random sort, alpha sort, genre filter, detail endpoint, 404, and counts. | Yes | agent |
 | D013 | M001/S05 | requirement | R008 Topics Browse Page status | validated | TopicsBrowse.tsx renders two-level topic hierarchy (6 categories from canonical_tags.yaml with expandable sub-topics showing technique_count and creator_count). Filter input narrows categories/sub-topics. Clicking sub-topic navigates to search with scope=topics. Backend GET /api/v1/topics aggregates counts from DB per sub-topic. Integration test verifies topic hierarchy response shape. | Yes | agent |
 | D014 | M001/S05 | requirement | R014 Creator Equity status | validated | CreatorsBrowse.tsx defaults to sort=random. Backend uses func.random() ORDER BY for randomized sort. Integration test verifies random sort returns all creators (order may vary). All creators get equal visual weight in the UI — no featured/highlighted treatment. Equal-weight row layout confirmed in CSS. | Yes | agent |
+| D015 | M002/S01 | architecture | Docker network subnet for Chrysopedia on ub01 | 172.32.0.0/24 — free on ub01, replaces 172.24.0.0/24 which is used by xpltd_docs_default | 172.24.0.0/24 was already allocated to xpltd_docs_default network on ub01. Scanned all existing subnets and 172.32.0.0/24 was the first unoccupied /24 in the 172.x range. | Yes | agent |
+| D016 | M002/S01 | architecture | Embedding service for the pipeline and search — OpenWebUI doesn't serve /v1/embeddings | Add Ollama container (ollama/ollama:latest) to the compose stack running nomic-embed-text on CPU | The FYN OpenWebUI instance at chat.forgetyour.name returns 404/500 on /v1/embeddings. No Ollama instance exists on the network. Ollama provides the standard OpenAI-compatible /v1/embeddings endpoint that both EmbeddingClient and SearchService expect. | Yes | agent |

.gsd/KNOWLEDGE.md

@@ -77,3 +77,32 @@
 **Context:** Celery pipeline stages that call external services (embedding API, Qdrant) should not fail the entire pipeline if those services are down. Stage 6 (embed_and_index) is valuable but not critical — the pipeline's primary output (technique pages in PostgreSQL) doesn't depend on it.
 
 **Fix:** Use `max_retries=0` and a catch-all exception handler that logs WARNING and returns without raising. The pipeline orchestrator chains stage 6 after stage 5 but a failure there doesn't prevent `processing_status` from reaching its final state. This pattern applies to any "best-effort enrichment" stage in a pipeline.
+
+## Container healthcheck tool availability varies by base image
+
+**Context:** Qdrant (distroless-ish), Ollama, and nginx-alpine images don't have curl or wget. Standard healthcheck patterns like `curl -f http://localhost:PORT/health` fail silently inside these containers.
+
+**Fix by image:**
+- **Ollama:** Use `ollama list` (built-in CLI)
+- **Qdrant:** Use `bash -c 'echo > /dev/tcp/localhost/6333'` (bash is available)
+- **nginx-alpine:** Use `curl` (available) but NOT busybox `wget` (fails on localhost)
+- **Celery worker (same image as API):** Use `celery -A worker inspect ping` instead of HTTP healthcheck
+
+**Rule:** Always `docker exec <container> <healthcheck-cmd>` to verify the command works before deploying.
+
+## XPLTD domain setup flow
+
+**Context:** Adding a new external domain (like chrysopedia.com) to the XPLTD infrastructure requires three steps across two machines.
+
+**Flow:**
+1. **AdGuard on ub01 (10.0.0.10):** Add DNS rewrite via API: `POST /control/rewrite/add` with `{domain, answer: "10.0.0.9"}`
+2. **nginx on nuc01 (10.0.0.9):** Create server block in `/etc/nginx/sites-enabled/{domain}.conf` with `proxy_pass http://10.0.0.10:{port}`
+3. **Certbot on nuc01:** `sudo certbot --nginx -d {domain}` (requires external DNS A record or CNAME pointing to public IP first)
+
+**Note:** The AD DNS servers (10.0.0.15/.16) may already have CNAME entries for domains. Check `nslookup {domain} 10.0.0.15` before assuming setup is needed. ub01's resolv.conf uses AD DNS, not AdGuard, so `curl {domain}` from ub01 requires the AD DNS chain to resolve.
+
+## Alembic env.py sys.path needs both local and Docker paths
+
+**Context:** Alembic's env.py imports from `database` and `models`, which live in `backend/` locally but at `/app/` (the WORKDIR) inside Docker. The original `sys.path.insert(0, "../backend")` works locally but fails in Docker.
+
+**Fix:** Add both paths: `sys.path.insert(0, os.path.join(os.path.dirname(__file__), "..", "backend"))` AND `sys.path.insert(0, os.path.join(os.path.dirname(__file__), ".."))`. The second resolves to `/app/` inside Docker.

.gsd/STATE.md

@@ -0,0 +1,20 @@
+# GSD State
+
+**Active Milestone:** M003: M003: Domain + DNS + Per-Stage LLM Model Routing
+**Active Slice:** None
+**Phase:** complete
+**Requirements Status:** 0 active · 0 validated · 0 deferred · 0 out of scope
+
+## Milestone Registry
+- ✅ **M001:** Chrysopedia Foundation — Infrastructure, Pipeline Core, and Skeleton UI
+- ✅ **M002:** M002: Chrysopedia Deployment — GitHub, ub01 Docker Stack, and Production Wiring
+- ✅ **M003:** M003: Domain + DNS + Per-Stage LLM Model Routing
+
+## Recent Decisions
+- None recorded
+
+## Blockers
+- None
+
+## Next Action
+All milestones complete.

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+{"ts":"2026-03-30T00:23:06.709Z","flowId":"c998cd74-b4b5-4628-85e0-403472595c42","seq":4,"eventType":"unit-end","data":{"unitType":"validate-milestone","unitId":"M001","status":"completed","artifactVerified":true},"causedBy":{"flowId":"c998cd74-b4b5-4628-85e0-403472595c42","seq":3}}
+{"ts":"2026-03-30T00:23:06.810Z","flowId":"c998cd74-b4b5-4628-85e0-403472595c42","seq":5,"eventType":"iteration-end","data":{"iteration":38}}
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+{"ts":"2026-03-30T00:23:06.926Z","flowId":"e9b00669-0e1c-44fd-b7c2-896bde877cab","seq":2,"eventType":"dispatch-match","rule":"completing-milestone → complete-milestone","data":{"unitType":"complete-milestone","unitId":"M001"}}
+{"ts":"2026-03-30T00:23:06.938Z","flowId":"e9b00669-0e1c-44fd-b7c2-896bde877cab","seq":3,"eventType":"unit-start","data":{"unitType":"complete-milestone","unitId":"M001"}}
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+{"ts":"2026-03-30T00:29:45.460Z","flowId":"e9b00669-0e1c-44fd-b7c2-896bde877cab","seq":5,"eventType":"iteration-end","data":{"iteration":39}}
+{"ts":"2026-03-30T00:29:45.461Z","flowId":"877640bc-9593-49e1-a1b5-9acf91db29d7","seq":1,"eventType":"iteration-start","data":{"iteration":40}}
+{"ts":"2026-03-30T00:29:45.561Z","flowId":"ca62a820-1944-4b25-a497-f85a7881c314","seq":0,"eventType":"worktree-merge-start","data":{"milestoneId":"M001","mode":"none"}}
+{"ts":"2026-03-30T00:29:45.732Z","flowId":"877640bc-9593-49e1-a1b5-9acf91db29d7","seq":2,"eventType":"terminal","data":{"reason":"milestone-complete","milestoneId":"M001"}}

.gsd/milestones/M002/M002-ROADMAP.md

@@ -0,0 +1,11 @@
+# M002: 
+
+## Vision
+Push the Chrysopedia codebase to GitHub (xpltdco/chrysopedia, private), clone to ub01 at /vmPool/r/repos/xpltdco/chrysopedia, build Docker images, deploy the full compose stack following XPLTD conventions, fix subnet/port conflicts, add Qdrant to the stack, wire environment secrets, run Alembic migrations, and establish the ub01 clone as the canonical development directory going forward.
+
+## Slice Overview
+| ID | Slice | Risk | Depends | Done | After this |
+|----|-------|------|---------|------|------------|
+| S01 | Fix Compose Config, Add Qdrant/Embeddings, Push to GitHub | medium | — | ✅ | GitHub repo exists with corrected compose config; docker compose config validates with new subnet, Qdrant service, and embedding model |
+| S02 | Deploy to ub01 — Clone, Build, Start, Migrate | medium | S01 | ✅ | All containers running healthy on ub01, web UI accessible at :8096, API health endpoint returns 200 |
+| S03 | CLAUDE.md Redirect and Development Path Setup | low | S02 | ✅ | CLAUDE.md in dev directory points to ub01 canonical path; future GSD sessions know where to work |

.gsd/milestones/M002/M002-SUMMARY.md

@@ -0,0 +1,52 @@
+---
+id: M002
+title: "Chrysopedia Deployment — GitHub, ub01 Docker Stack, and Production Wiring"
+status: complete
+completed_at: 2026-03-30T01:30:04.974Z
+key_decisions:
+  - D015: Subnet 172.32.0.0/24 for Chrysopedia network (172.24 taken by xpltd_docs)
+  - D016: Ollama container for embedding model (nomic-embed-text) since OpenWebUI doesn't serve /v1/embeddings
+  - D017: Compose directory uses symlink to repo's docker-compose.yml
+  - D018: SSH agent forwarding for git clone on ub01 (no gh CLI)
+key_files:
+  - docker-compose.yml
+  - docker/Dockerfile.api
+  - alembic/env.py
+  - .env.example
+  - CLAUDE.md
+  - README.md
+lessons_learned:
+  - Qdrant, Ollama, and nginx-alpine images lack common tools (curl, wget) — always verify healthcheck commands work inside the actual container image before deploying
+  - Alembic env.py sys.path needs both ../backend/ (local dev) and ../ (Docker where backend code is at WORKDIR)
+  - ZFS with Active Directory integration can cause uid mismatches (local uid 1000 vs AD uid 11103) — use sudo chown when needed
+  - Celery workers need celery inspect ping for healthcheck, not HTTP — same Docker image but different entrypoint
+  - SSH agent forwarding (-A flag) is required for git clone on servers without GitHub credentials
+---
+
+# M002: Chrysopedia Deployment — GitHub, ub01 Docker Stack, and Production Wiring
+
+**Pushed codebase to GitHub (xpltdco/chrysopedia), deployed 7-container Docker stack to ub01 (all healthy on port 8096), ran Alembic migration, pulled embedding model, and established ub01 as the canonical development directory.**
+
+## What Happened
+
+M002 delivered the full deployment pipeline across 3 slices and 4 tasks.\n\n**S01** fixed the Docker Compose configuration: changed the network subnet from 172.24.0.0/24 (occupied by xpltd_docs) to 172.32.0.0/24, added Qdrant vector database and Ollama embedding services (bringing the stack to 7 containers), changed the web UI external port to 8096 following XPLTD port-suffix naming convention, and removed the API host port mapping (internal only via nginx proxy). Created the private GitHub repo xpltdco/chrysopedia and pushed the full codebase.\n\n**S02** deployed to ub01: cloned the repo (via SSH agent forwarding due to no gh CLI on server), created the /vmPool/r/compose/xpltd_chrysopedia/ directory with a symlink to the repo's docker-compose.yml, created all bind-mount service directories, wrote .env with production secrets (LLM API key, DB password), built all 3 Docker images. Fixed 4 healthcheck issues iteratively — Ollama image lacks curl (use `ollama list`), Qdrant image lacks wget/curl (use `bash /dev/tcp`), nginx-alpine's busybox wget fails on localhost (use curl), and the worker doesn't serve HTTP (use `celery inspect ping`). Fixed Alembic env.py sys.path for Docker layout where backend code is at /app/ not /app/../backend/. Ran the 001_initial Alembic migration creating all 7 tables. Pulled nomic-embed-text (274MB) into the Ollama container for embeddings.\n\n**S03** created CLAUDE.md in the dev directory redirecting future development to the ub01 canonical path (/vmPool/r/repos/xpltdco/chrysopedia), and updated README.md with a deployment section including service URLs, update workflow, and first-time setup instructions.
+
+## Success Criteria Results
+
+### 1. GitHub repo xpltdco/chrysopedia exists (private) ✅\n`gh repo view xpltdco/chrysopedia --json visibility` returns PRIVATE\n\n### 2. Code cloned to /vmPool/r/repos/xpltdco/chrysopedia on ub01 ✅\nAll files present, git log matches GitHub, git pull works with SSH agent forwarding\n\n### 3. docker compose up -d starts all 7 services healthy ✅\nAll 7 containers show healthy status: db, redis, qdrant, ollama, api, worker, web-8096\n\n### 4. Alembic migrations run successfully ✅\n`docker exec chrysopedia-api alembic current` returns `001_initial (head)`\n\n### 5. GET /health returns healthy ✅\n`curl http://localhost:8096/health` returns `{status:ok, database:connected}`\n\n### 6. Web UI accessible on ub01:8096 ✅\n`curl http://localhost:8096/` returns valid HTML with React app\n\n### 7. CLAUDE.md redirects future development ✅\nCLAUDE.md exists with clear redirect to ub01 path\n\n### 8. Compose file at /vmPool/r/compose/xpltd_chrysopedia/ ✅\nSymlink verified: docker-compose.yml → repo's docker-compose.yml
+
+## Definition of Done Results
+
+| # | Item | Met | Evidence |\n|---|------|-----|----------|\n| 1 | GitHub repo created (private) | ✅ | gh repo view returns PRIVATE |\n| 2 | Clone on ub01 up to date | ✅ | git pull succeeds, all files present |\n| 3 | docker-compose.yml at compose dir | ✅ | Symlink at /vmPool/r/compose/xpltd_chrysopedia/ |\n| 4 | All containers healthy | ✅ | docker ps shows 7/7 healthy |\n| 5 | Alembic migration applied | ✅ | alembic current returns 001_initial (head) |\n| 6 | .env with correct credentials | ✅ | Health endpoint confirms DB connected, LLM API key set |\n| 7 | CLAUDE.md redirect | ✅ | File exists with ub01 path |\n| 8 | README updated | ✅ | Deployment section with service URLs |
+
+## Requirement Outcomes
+
+### R010 — Docker Compose Deployment: validated → validated (reinforced)\nNow proven end-to-end on actual ub01 hardware: docker compose up -d brings up all 7 services, data persists at /vmPool/r/services/chrysopedia_*, compose config at /vmPool/r/compose/xpltd_chrysopedia/ with XPLTD naming conventions.
+
+## Deviations
+
+4 healthcheck fixes needed iteratively (Ollama, Qdrant, web, worker lacked expected CLI tools). Alembic env.py sys.path needed Docker-aware fix. ZFS uid mismatch required sudo chown.
+
+## Follow-ups
+
+Set up a cron job or systemd timer on ub01 to auto-restart chrysopedia containers on reboot. Consider adding GPU passthrough for Ollama if embedding performance needs improvement.

.gsd/milestones/M002/slices/S01/S01-PLAN.md

@@ -0,0 +1,24 @@
+# S01: Fix Compose Config, Add Qdrant/Embeddings, Push to GitHub
+
+**Goal:** Fix the compose file (subnet, ports, add Qdrant + embedding model), create GitHub repo, push code
+**Demo:** After this: GitHub repo exists with corrected compose config; docker compose config validates with new subnet, Qdrant service, and embedding model
+
+## Tasks
+- [x] **T01: Fixed compose config: subnet 172.32.0.0/24, port 8096, added Qdrant + Ollama services, 7 services validate** — 1. Change network subnet from 172.24.0.0/24 (taken by xpltd_docs) to 172.32.0.0/24 (free)
+2. Change web UI external port from 3000 to 8096
+3. Remove host port mapping for API (internal only via nginx proxy)
+4. Add Qdrant service with healthcheck
+5. Add embedding model service (all-minilm or nomic-embed-text via text-embeddings-inference)
+6. Add prompts and config volumes to worker
+7. Update QDRANT_URL env to point to chrysopedia-qdrant
+8. Update .env.example with correct LLM/embedding URLs
+9. Verify docker compose config exits 0
+  - Estimate: 15min
+  - Files: docker-compose.yml, .env.example
+  - Verify: docker compose config > /dev/null && echo PASS
+- [x] **T02: Created private xpltdco/chrysopedia repo on GitHub and pushed full codebase** — 1. Create xpltdco/chrysopedia private repo on GitHub
+2. Add GitHub remote to local repo
+3. Push all branches and tags
+4. Verify repo exists with gh repo view
+  - Estimate: 5min
+  - Verify: gh repo view xpltdco/chrysopedia --json name,visibility

.gsd/milestones/M002/slices/S01/S01-SUMMARY.md

@@ -0,0 +1,79 @@
+---
+id: S01
+parent: M002
+milestone: M002
+provides:
+  - GitHub repo xpltdco/chrysopedia (private) with full history
+  - Corrected docker-compose.yml with 7 services ready for deployment
+requires:
+  []
+affects:
+  - S02
+key_files:
+  - docker-compose.yml
+  - .env.example
+  - docker/Dockerfile.api
+key_decisions:
+  - Subnet 172.32.0.0/24 (free, replaces 172.24.0.0/24 taken by xpltd_docs)
+  - Ollama container for embedding model (nomic-embed-text)
+  - Web UI on port 8096
+  - API internal-only via nginx
+patterns_established:
+  - XPLTD container naming with port suffix: chrysopedia-web-8096
+observability_surfaces:
+  - Qdrant healthcheck at /healthz
+  - Ollama healthcheck at /api/tags
+drill_down_paths:
+  - .gsd/milestones/M002/slices/S01/tasks/T01-SUMMARY.md
+  - .gsd/milestones/M002/slices/S01/tasks/T02-SUMMARY.md
+duration: ""
+verification_result: passed
+completed_at: 2026-03-30T01:09:20.441Z
+blocker_discovered: false
+---
+
+# S01: Fix Compose Config, Add Qdrant/Embeddings, Push to GitHub
+
+**Fixed compose config (subnet, ports, Qdrant, Ollama), created private GitHub repo, pushed codebase**
+
+## What Happened
+
+Fixed the compose configuration: changed subnet from 172.24.0.0/24 (occupied by xpltd_docs) to 172.32.0.0/24, added Qdrant vector database and Ollama embedding services, changed web UI port to 8096, removed API host port (internal only via nginx proxy). Created the private GitHub repo xpltdco/chrysopedia and pushed the full codebase. 7 services validate with docker compose config.
+
+## Verification
+
+docker compose config exits 0, 7 services listed, gh repo view returns private repo
+
+## Requirements Advanced
+
+- R010 — Compose config corrected for real deployment on ub01
+
+## Requirements Validated
+
+None.
+
+## New Requirements Surfaced
+
+None.
+
+## Requirements Invalidated or Re-scoped
+
+None.
+
+## Deviations
+
+Added Ollama container for embedding model — not in original M001 compose spec but required since no external embedding API is available.
+
+## Known Limitations
+
+Ollama will need nomic-embed-text model pulled on first startup.
+
+## Follow-ups
+
+None.
+
+## Files Created/Modified
+
+- `docker-compose.yml` — Corrected subnet, added Qdrant + Ollama services, web port 8096, EMBEDDING_API_URL
+- `.env.example` — Updated LLM/embedding URLs for FYN DGX endpoint and Ollama container
+- `docker/Dockerfile.api` — Added curl + HEALTHCHECK, copies prompts/ and config/ into image

.gsd/milestones/M002/slices/S01/S01-UAT.md

@@ -0,0 +1,6 @@
+# S01: Fix Compose Config, Add Qdrant/Embeddings, Push to GitHub — UAT
+
+**Milestone:** M002
+**Written:** 2026-03-30T01:09:20.441Z
+
+## UAT: S01 — Fix Compose Config, Add Qdrant/Embeddings, Push to GitHub\n\n- [x] docker compose config exits 0 with 7 services\n- [x] Subnet is 172.32.0.0/24 (not conflicting)\n- [x] gh repo view xpltdco/chrysopedia returns private repo\n- [x] Web port is 8096\n- [x] Qdrant and Ollama services defined with healthchecks

.gsd/milestones/M002/slices/S01/tasks/T01-PLAN.md

@@ -0,0 +1,31 @@
+---
+estimated_steps: 9
+estimated_files: 2
+skills_used: []
+---
+
+# T01: Fix docker-compose.yml: subnet, ports, add Qdrant + embedding service
+
+1. Change network subnet from 172.24.0.0/24 (taken by xpltd_docs) to 172.32.0.0/24 (free)
+2. Change web UI external port from 3000 to 8096
+3. Remove host port mapping for API (internal only via nginx proxy)
+4. Add Qdrant service with healthcheck
+5. Add embedding model service (all-minilm or nomic-embed-text via text-embeddings-inference)
+6. Add prompts and config volumes to worker
+7. Update QDRANT_URL env to point to chrysopedia-qdrant
+8. Update .env.example with correct LLM/embedding URLs
+9. Verify docker compose config exits 0
+
+## Inputs
+
+- `docker-compose.yml`
+- `.env.example`
+
+## Expected Output
+
+- `docker-compose.yml (updated)`
+- `.env.example (updated)`
+
+## Verification
+
+docker compose config > /dev/null && echo PASS

.gsd/milestones/M002/slices/S01/tasks/T01-SUMMARY.md

@@ -0,0 +1,83 @@
+---
+id: T01
+parent: S01
+milestone: M002
+provides: []
+requires: []
+affects: []
+key_files: ["docker-compose.yml", ".env.example", "docker/Dockerfile.api"]
+key_decisions: ["Subnet changed from 172.24.0.0/24 (taken) to 172.32.0.0/24", "Added Ollama container for embedding since OpenWebUI doesn't serve /v1/embeddings", "Web UI exposed on 0.0.0.0:8096 (not 127.0.0.1) for external access", "API port removed from host mapping — accessed only via nginx proxy", "Container name convention: chrysopedia-web-8096 matches XPLTD port-suffix pattern"]
+patterns_established: []
+drill_down_paths: []
+observability_surfaces: []
+duration: ""
+verification_result: "docker compose config exits 0 with 7 services listed"
+completed_at: 2026-03-30T00:54:07.455Z
+blocker_discovered: false
+---
+
+# T01: Fixed compose config: subnet 172.32.0.0/24, port 8096, added Qdrant + Ollama services, 7 services validate
+
+> Fixed compose config: subnet 172.32.0.0/24, port 8096, added Qdrant + Ollama services, 7 services validate
+
+## What Happened
+---
+id: T01
+parent: S01
+milestone: M002
+key_files:
+  - docker-compose.yml
+  - .env.example
+  - docker/Dockerfile.api
+key_decisions:
+  - Subnet changed from 172.24.0.0/24 (taken) to 172.32.0.0/24
+  - Added Ollama container for embedding since OpenWebUI doesn't serve /v1/embeddings
+  - Web UI exposed on 0.0.0.0:8096 (not 127.0.0.1) for external access
+  - API port removed from host mapping — accessed only via nginx proxy
+  - Container name convention: chrysopedia-web-8096 matches XPLTD port-suffix pattern
+duration: ""
+verification_result: passed
+completed_at: 2026-03-30T00:54:07.456Z
+blocker_discovered: false
+---
+
+# T01: Fixed compose config: subnet 172.32.0.0/24, port 8096, added Qdrant + Ollama services, 7 services validate
+
+**Fixed compose config: subnet 172.32.0.0/24, port 8096, added Qdrant + Ollama services, 7 services validate**
+
+## What Happened
+
+Fixed docker-compose.yml with corrected subnet (172.32.0.0/24), added Qdrant (v1.13.2) and Ollama services for vector DB and embedding model respectively. Changed web UI port from 127.0.0.1:3000 to 0.0.0.0:8096 for external access. Removed API host port mapping — API is only accessible via the nginx reverse proxy. Added EMBEDDING_API_URL env var pointing to the Ollama container. Updated .env.example with correct FYN DGX LLM endpoint. Added healthchecks to Dockerfile.api and web container. All 7 services validate with docker compose config.
+
+## Verification
+
+docker compose config exits 0 with 7 services listed
+
+## Verification Evidence
+
+| # | Command | Exit Code | Verdict | Duration |
+|---|---------|-----------|---------|----------|
+| 1 | `docker compose config > /dev/null` | 0 | ✅ pass | 800ms |
+| 2 | `docker compose config --services` | 0 | ✅ pass — 7 services: db, ollama, qdrant, redis, api, web, worker | 700ms |
+
+
+## Deviations
+
+Added Ollama container for embedding model service (no external embedding endpoint available). Added chrysopedia-ollama service with Ollama for nomic-embed-text. Removed bind-mount of ./backend:/app from API container (images copy code at build time). Added HEALTHCHECK to Dockerfile.api. Container name for web uses port suffix convention: chrysopedia-web-8096.
+
+## Known Issues
+
+Ollama container will need nomic-embed-text model pulled after first start.
+
+## Files Created/Modified
+
+- `docker-compose.yml`
+- `.env.example`
+- `docker/Dockerfile.api`
+
+
+## Deviations
+Added Ollama container for embedding model service (no external embedding endpoint available). Added chrysopedia-ollama service with Ollama for nomic-embed-text. Removed bind-mount of ./backend:/app from API container (images copy code at build time). Added HEALTHCHECK to Dockerfile.api. Container name for web uses port suffix convention: chrysopedia-web-8096.
+
+## Known Issues
+Ollama container will need nomic-embed-text model pulled after first start.

.gsd/milestones/M002/slices/S01/tasks/T02-PLAN.md

@@ -0,0 +1,24 @@
+---
+estimated_steps: 4
+estimated_files: 1
+skills_used: []
+---
+
+# T02: Create GitHub repo and push codebase
+
+1. Create xpltdco/chrysopedia private repo on GitHub
+2. Add GitHub remote to local repo
+3. Push all branches and tags
+4. Verify repo exists with gh repo view
+
+## Inputs
+
+- None specified.
+
+## Expected Output
+
+- `GitHub repo xpltdco/chrysopedia (private)`
+
+## Verification
+
+gh repo view xpltdco/chrysopedia --json name,visibility

.gsd/milestones/M002/slices/S01/tasks/T02-SUMMARY.md

@@ -0,0 +1,74 @@
+---
+id: T02
+parent: S01
+milestone: M002
+provides: []
+requires: []
+affects: []
+key_files: []
+key_decisions: ["Used gh repo create --source . --push to create and push in one command"]
+patterns_established: []
+drill_down_paths: []
+observability_surfaces: []
+duration: ""
+verification_result: "gh repo view xpltdco/chrysopedia returns name=chrysopedia, visibility=PRIVATE"
+completed_at: 2026-03-30T01:08:54.478Z
+blocker_discovered: false
+---
+
+# T02: Created private xpltdco/chrysopedia repo on GitHub and pushed full codebase
+
+> Created private xpltdco/chrysopedia repo on GitHub and pushed full codebase
+
+## What Happened
+---
+id: T02
+parent: S01
+milestone: M002
+key_files:
+  - (none)
+key_decisions:
+  - Used gh repo create --source . --push to create and push in one command
+duration: ""
+verification_result: passed
+completed_at: 2026-03-30T01:08:54.478Z
+blocker_discovered: false
+---
+
+# T02: Created private xpltdco/chrysopedia repo on GitHub and pushed full codebase
+
+**Created private xpltdco/chrysopedia repo on GitHub and pushed full codebase**
+
+## What Happened
+
+Created private GitHub repo xpltdco/chrysopedia and pushed the full codebase including the corrected compose config from T01. Repo is tracking origin/main.
+
+## Verification
+
+gh repo view xpltdco/chrysopedia returns name=chrysopedia, visibility=PRIVATE
+
+## Verification Evidence
+
+| # | Command | Exit Code | Verdict | Duration |
+|---|---------|-----------|---------|----------|
+| 1 | `gh repo view xpltdco/chrysopedia --json name,visibility,url` | 0 | ✅ pass — private repo created at https://github.com/xpltdco/chrysopedia | 1200ms |
+
+
+## Deviations
+
+None.
+
+## Known Issues
+
+None.
+
+## Files Created/Modified
+
+None.
+
+
+## Deviations
+None.
+
+## Known Issues
+None.

.gsd/milestones/M002/slices/S02/S02-PLAN.md

@@ -0,0 +1,19 @@
+# S02: Deploy to ub01 — Clone, Build, Start, Migrate
+
+**Goal:** Clone repo to ub01, create .env with secrets, build images, start stack, run Alembic migration, verify health
+**Demo:** After this: All containers running healthy on ub01, web UI accessible at :8096, API health endpoint returns 200
+
+## Tasks
+- [x] **T01: Full 7-container stack deployed and healthy on ub01 — API, worker, web, DB, Redis, Qdrant, Ollama all running with Alembic migration applied** — 1. Git clone xpltdco/chrysopedia to /vmPool/r/repos/xpltdco/chrysopedia on ub01
+2. Create /vmPool/r/compose/xpltd_chrysopedia/ and symlink docker-compose.yml
+3. Create service directories for bind mounts
+4. Create .env with production secrets (LLM key, DB password, etc.)
+5. Build docker images
+6. Start the stack with docker compose up -d
+7. Pull nomic-embed-text model into Ollama container
+8. Run Alembic migration against the production database
+9. Verify all containers healthy
+10. Verify GET /health returns 200
+11. Verify web UI loads on port 8096
+  - Estimate: 20min
+  - Verify: ssh ub01 'docker ps --filter name=chrysopedia --format "{{.Names}} {{.Status}}"' && ssh ub01 'curl -s http://localhost:8096/health'

.gsd/milestones/M002/slices/S02/S02-SUMMARY.md

@@ -0,0 +1,81 @@
+---
+id: S02
+parent: M002
+milestone: M002
+provides:
+  - Running Chrysopedia stack on ub01 (all 7 containers healthy)
+  - PostgreSQL schema at 001_initial migration
+  - Embedding model (nomic-embed-text) available via Ollama
+requires:
+  - slice: S01
+    provides: Corrected docker-compose.yml with 7 services
+affects:
+  - S03
+key_files:
+  - docker-compose.yml
+  - docker/Dockerfile.api
+  - alembic/env.py
+key_decisions:
+  - SSH agent forwarding for git clone on ub01 (no gh CLI)
+  - Compose dir symlinks to repo's docker-compose.yml
+  - nomic-embed-text as embedding model (274MB, CPU-only)
+patterns_established:
+  - XPLTD compose symlink pattern: /vmPool/r/compose/xpltd_chrysopedia/ → repo's docker-compose.yml
+  - Container healthcheck patterns: ollama list, bash /dev/tcp, celery inspect ping for non-HTTP services
+observability_surfaces:
+  - GET :8096/health returns API health + DB connectivity
+  - docker ps shows all 7 containers healthy
+  - Celery inspect ping confirms worker is processing
+drill_down_paths:
+  - .gsd/milestones/M002/slices/S02/tasks/T01-SUMMARY.md
+duration: ""
+verification_result: passed
+completed_at: 2026-03-30T01:27:39.567Z
+blocker_discovered: false
+---
+
+# S02: Deploy to ub01 — Clone, Build, Start, Migrate
+
+**Full 7-container Chrysopedia stack deployed and healthy on ub01 at port 8096**
+
+## What Happened
+
+Deployed the full Chrysopedia stack to ub01: cloned repo, created compose/service directories following XPLTD conventions, built Docker images, started all 7 containers, fixed multiple healthcheck issues iteratively, ran Alembic migration, and pulled the nomic-embed-text embedding model. All services are healthy and accessible.
+
+## Verification
+
+7/7 containers healthy, health endpoint returns ok, web UI loads, Alembic at head, embedding model pulled
+
+## Requirements Advanced
+
+- R010 — Full docker compose up -d on ub01 with all services healthy
+
+## Requirements Validated
+
+- R010 — docker compose up -d on ub01: 7 containers healthy, compose config validates, XPLTD conventions followed (bind mounts at /vmPool/r/services/, network 172.32.0.0/24, project name xpltd_chrysopedia)
+
+## New Requirements Surfaced
+
+None.
+
+## Requirements Invalidated or Re-scoped
+
+None.
+
+## Deviations
+
+4 healthcheck fixes needed iteratively (Ollama, Qdrant, web, worker images lack expected CLI tools). ZFS uid mismatch required sudo chown. Alembic env.py sys.path needed Docker-aware fix. SSH agent forwarding required for git clone.
+
+## Known Limitations
+
+Embedding model runs on CPU (no GPU passthrough configured for Ollama container).
+
+## Follow-ups
+
+None.
+
+## Files Created/Modified
+
+- `docker-compose.yml` — Healthcheck fixes for Ollama (ollama list), Qdrant (bash /dev/tcp), web (curl), worker (celery inspect ping)
+- `docker/Dockerfile.api` — Added alembic.ini and alembic/ to Docker image
+- `alembic/env.py` — Added parent dir to sys.path for Docker layout compatibility

.gsd/milestones/M002/slices/S02/S02-UAT.md

@@ -0,0 +1,6 @@
+# S02: Deploy to ub01 — Clone, Build, Start, Migrate — UAT
+
+**Milestone:** M002
+**Written:** 2026-03-30T01:27:39.567Z
+
+## UAT: S02 — Deploy to ub01\n\n- [x] All 7 containers healthy: db, redis, qdrant, ollama, api, worker, web\n- [x] GET /health returns {status:ok, database:connected}\n- [x] Web UI loads at :8096\n- [x] Alembic migration 001_initial applied\n- [x] Embedding model nomic-embed-text available in Ollama\n- [x] Compose directory at /vmPool/r/compose/xpltd_chrysopedia/ with symlink

.gsd/milestones/M002/slices/S02/tasks/T01-PLAN.md

@@ -0,0 +1,35 @@
+---
+estimated_steps: 11
+estimated_files: 3
+skills_used: []
+---
+
+# T01: Clone, build, deploy, and verify full stack on ub01
+
+1. Git clone xpltdco/chrysopedia to /vmPool/r/repos/xpltdco/chrysopedia on ub01
+2. Create /vmPool/r/compose/xpltd_chrysopedia/ and symlink docker-compose.yml
+3. Create service directories for bind mounts
+4. Create .env with production secrets (LLM key, DB password, etc.)
+5. Build docker images
+6. Start the stack with docker compose up -d
+7. Pull nomic-embed-text model into Ollama container
+8. Run Alembic migration against the production database
+9. Verify all containers healthy
+10. Verify GET /health returns 200
+11. Verify web UI loads on port 8096
+
+## Inputs
+
+- `docker-compose.yml`
+- `.env.example`
+- `alembic/`
+
+## Expected Output
+
+- `All containers running on ub01`
+- `Alembic migration applied`
+- `Health endpoint returns 200`
+
+## Verification
+
+ssh ub01 'docker ps --filter name=chrysopedia --format "{{.Names}} {{.Status}}"' && ssh ub01 'curl -s http://localhost:8096/health'

.gsd/milestones/M002/slices/S02/tasks/T01-SUMMARY.md

@@ -0,0 +1,83 @@
+---
+id: T01
+parent: S02
+milestone: M002
+provides: []
+requires: []
+affects: []
+key_files: ["docker-compose.yml", "docker/Dockerfile.api", "alembic/env.py"]
+key_decisions: ["Used SSH agent forwarding for git clone on ub01 (no gh CLI or git credentials on server)", "Compose directory uses symlink to repo's docker-compose.yml following XPLTD pattern", "nomic-embed-text pulled into Ollama container (274MB)"]
+patterns_established: []
+drill_down_paths: []
+observability_surfaces: []
+duration: ""
+verification_result: "All 7 containers healthy, GET /health returns {status:ok, database:connected}, web UI loads at :8096, Alembic at 001_initial head"
+completed_at: 2026-03-30T01:27:16.896Z
+blocker_discovered: false
+---
+
+# T01: Full 7-container stack deployed and healthy on ub01 — API, worker, web, DB, Redis, Qdrant, Ollama all running with Alembic migration applied
+
+> Full 7-container stack deployed and healthy on ub01 — API, worker, web, DB, Redis, Qdrant, Ollama all running with Alembic migration applied
+
+## What Happened
+---
+id: T01
+parent: S02
+milestone: M002
+key_files:
+  - docker-compose.yml
+  - docker/Dockerfile.api
+  - alembic/env.py
+key_decisions:
+  - Used SSH agent forwarding for git clone on ub01 (no gh CLI or git credentials on server)
+  - Compose directory uses symlink to repo's docker-compose.yml following XPLTD pattern
+  - nomic-embed-text pulled into Ollama container (274MB)
+duration: ""
+verification_result: passed
+completed_at: 2026-03-30T01:27:16.896Z
+blocker_discovered: false
+---
+
+# T01: Full 7-container stack deployed and healthy on ub01 — API, worker, web, DB, Redis, Qdrant, Ollama all running with Alembic migration applied
+
+**Full 7-container stack deployed and healthy on ub01 — API, worker, web, DB, Redis, Qdrant, Ollama all running with Alembic migration applied**
+
+## What Happened
+
+Deployed the full Chrysopedia stack to ub01. Cloned repo via SSH agent forwarding to /vmPool/r/repos/xpltdco/chrysopedia. Created compose directory at /vmPool/r/compose/xpltd_chrysopedia/ with symlink. Created all service bind-mount directories. Wrote .env with production secrets. Built all 3 Docker images (API, worker, web). Started the stack — fixed 4 healthcheck issues iteratively (Ollama, Qdrant, web, worker all lacked the expected CLI tools). Fixed alembic env.py sys.path for Docker layout. Ran Alembic migration 001_initial. Pulled nomic-embed-text (274MB) into Ollama. All 7 containers healthy: chrysopedia-db, chrysopedia-redis, chrysopedia-qdrant, chrysopedia-ollama, chrysopedia-api, chrysopedia-worker, chrysopedia-web-8096. Health endpoint returns connected, web UI loads on port 8096.
+
+## Verification
+
+All 7 containers healthy, GET /health returns {status:ok, database:connected}, web UI loads at :8096, Alembic at 001_initial head
+
+## Verification Evidence
+
+| # | Command | Exit Code | Verdict | Duration |
+|---|---------|-----------|---------|----------|
+| 1 | `ssh ub01 'docker ps --filter name=chrysopedia --format table'` | 0 | ✅ pass — all 7 containers healthy | 1500ms |
+| 2 | `ssh ub01 'curl -s http://localhost:8096/health'` | 0 | ✅ pass — {status:ok, database:connected} | 800ms |
+| 3 | `ssh ub01 'curl -s http://localhost:8096/ | head -3'` | 0 | ✅ pass — HTML loads | 600ms |
+| 4 | `ssh ub01 'docker exec chrysopedia-api alembic current'` | 0 | ✅ pass — 001_initial (head) | 2000ms |
+
+
+## Deviations
+
+Multiple healthcheck fixes required: Ollama (no curl → use ollama list), Qdrant (no wget/curl → use bash /dev/tcp), web (busybox wget fails → use curl), worker (HTTP healthcheck fails → celery inspect ping). Alembic env.py needed sys.path fix for Docker layout. ZFS permissions required sudo chown for uid mismatch (AD uid 11103 vs local uid 1000). Git clone required SSH agent forwarding (-A flag).
+
+## Known Issues
+
+None.
+
+## Files Created/Modified
+
+- `docker-compose.yml`
+- `docker/Dockerfile.api`
+- `alembic/env.py`
+
+
+## Deviations
+Multiple healthcheck fixes required: Ollama (no curl → use ollama list), Qdrant (no wget/curl → use bash /dev/tcp), web (busybox wget fails → use curl), worker (HTTP healthcheck fails → celery inspect ping). Alembic env.py needed sys.path fix for Docker layout. ZFS permissions required sudo chown for uid mismatch (AD uid 11103 vs local uid 1000). Git clone required SSH agent forwarding (-A flag).
+
+## Known Issues
+None.

.gsd/milestones/M002/slices/S03/S03-PLAN.md

@@ -0,0 +1,13 @@
+# S03: CLAUDE.md Redirect and Development Path Setup
+
+**Goal:** Create CLAUDE.md redirect in dev directory, update project documentation for ub01-based development workflow
+**Demo:** After this: CLAUDE.md in dev directory points to ub01 canonical path; future GSD sessions know where to work
+
+## Tasks
+- [x] **T01: Created CLAUDE.md redirect and updated README with ub01 deployment documentation** — 1. Create CLAUDE.md in /home/aux/projects/content-to-kb-automator that clearly states the canonical development path is on ub01
+2. Include the SSH command and path to the canonical repo
+3. Update README.md with deployment section for ub01
+4. Commit and push to GitHub
+  - Estimate: 5min
+  - Files: CLAUDE.md, README.md
+  - Verify: test -f CLAUDE.md && grep -q 'ub01' CLAUDE.md && grep -q 'ub01' README.md

.gsd/milestones/M002/slices/S03/S03-SUMMARY.md

@@ -0,0 +1,73 @@
+---
+id: S03
+parent: M002
+milestone: M002
+provides:
+  - CLAUDE.md redirect for future sessions
+  - README deployment documentation
+requires:
+  - slice: S02
+    provides: Running stack on ub01
+affects:
+  []
+key_files:
+  - CLAUDE.md
+  - README.md
+key_decisions:
+  - CLAUDE.md in dev dir redirects all future work to ub01
+patterns_established:
+  - CLAUDE.md redirect pattern for moving canonical development path
+observability_surfaces:
+  - none
+drill_down_paths:
+  - .gsd/milestones/M002/slices/S03/tasks/T01-SUMMARY.md
+duration: ""
+verification_result: passed
+completed_at: 2026-03-30T01:29:13.529Z
+blocker_discovered: false
+---
+
+# S03: CLAUDE.md Redirect and Development Path Setup
+
+**CLAUDE.md redirect and README deployment docs established**
+
+## What Happened
+
+Created CLAUDE.md redirect and updated README with deployment documentation. Future GSD sessions starting in this directory will see the redirect to ub01.
+
+## Verification
+
+CLAUDE.md and README.md both reference ub01, pushed to GitHub
+
+## Requirements Advanced
+
+None.
+
+## Requirements Validated
+
+None.
+
+## New Requirements Surfaced
+
+None.
+
+## Requirements Invalidated or Re-scoped
+
+None.
+
+## Deviations
+
+None.
+
+## Known Limitations
+
+None.
+
+## Follow-ups
+
+None.
+
+## Files Created/Modified
+
+- `CLAUDE.md` — New file — redirects future development to ub01 canonical path
+- `README.md` — Added deployment section with service URLs and update workflow

.gsd/milestones/M002/slices/S03/S03-UAT.md

@@ -0,0 +1,6 @@
+# S03: CLAUDE.md Redirect and Development Path Setup — UAT
+
+**Milestone:** M002
+**Written:** 2026-03-30T01:29:13.529Z
+
+## UAT: S03 — CLAUDE.md Redirect\n\n- [x] CLAUDE.md exists in /home/aux/projects/content-to-kb-automator\n- [x] CLAUDE.md contains clear redirect to ub01 canonical path\n- [x] README.md contains deployment section with ub01 instructions\n- [x] Both files pushed to GitHub and pulled to ub01

.gsd/milestones/M002/slices/S03/tasks/T01-PLAN.md

@@ -0,0 +1,25 @@
+---
+estimated_steps: 4
+estimated_files: 2
+skills_used: []
+---
+
+# T01: Create CLAUDE.md redirect and update README deployment docs
+
+1. Create CLAUDE.md in /home/aux/projects/content-to-kb-automator that clearly states the canonical development path is on ub01
+2. Include the SSH command and path to the canonical repo
+3. Update README.md with deployment section for ub01
+4. Commit and push to GitHub
+
+## Inputs
+
+- None specified.
+
+## Expected Output
+
+- `CLAUDE.md`
+- `README.md (updated)`
+
+## Verification
+
+test -f CLAUDE.md && grep -q 'ub01' CLAUDE.md && grep -q 'ub01' README.md

.gsd/milestones/M002/slices/S03/tasks/T01-SUMMARY.md

@@ -0,0 +1,76 @@
+---
+id: T01
+parent: S03
+milestone: M002
+provides: []
+requires: []
+affects: []
+key_files: ["CLAUDE.md", "README.md"]
+key_decisions: ["CLAUDE.md in dev dir clearly states canonical path is on ub01"]
+patterns_established: []
+drill_down_paths: []
+observability_surfaces: []
+duration: ""
+verification_result: "CLAUDE.md exists, contains ub01 references, README.md contains ub01 deployment section"
+completed_at: 2026-03-30T01:28:59.921Z
+blocker_discovered: false
+---
+
+# T01: Created CLAUDE.md redirect and updated README with ub01 deployment documentation
+
+> Created CLAUDE.md redirect and updated README with ub01 deployment documentation
+
+## What Happened
+---
+id: T01
+parent: S03
+milestone: M002
+key_files:
+  - CLAUDE.md
+  - README.md
+key_decisions:
+  - CLAUDE.md in dev dir clearly states canonical path is on ub01
+duration: ""
+verification_result: passed
+completed_at: 2026-03-30T01:28:59.921Z
+blocker_discovered: false
+---
+
+# T01: Created CLAUDE.md redirect and updated README with ub01 deployment documentation
+
+**Created CLAUDE.md redirect and updated README with ub01 deployment documentation**
+
+## What Happened
+
+Created CLAUDE.md in the dev directory with clear redirect to ub01 canonical development path. Updated README.md with deployment section including service URLs, update workflow, and first-time setup instructions. Fixed outdated subnet reference (172.24 → 172.32). Both changes pushed to GitHub and pulled to ub01.
+
+## Verification
+
+CLAUDE.md exists, contains ub01 references, README.md contains ub01 deployment section
+
+## Verification Evidence
+
+| # | Command | Exit Code | Verdict | Duration |
+|---|---------|-----------|---------|----------|
+| 1 | `test -f CLAUDE.md && grep -q ub01 CLAUDE.md && grep -q ub01 README.md` | 0 | ✅ pass | 50ms |
+
+
+## Deviations
+
+None.
+
+## Known Issues
+
+None.
+
+## Files Created/Modified
+
+- `CLAUDE.md`
+- `README.md`
+
+
+## Deviations
+None.
+
+## Known Issues
+None.

.gsd/milestones/M003/M003-ROADMAP.md

@@ -0,0 +1,10 @@
+# M003: 
+
+## Vision
+Wire up chrysopedia.com with DNS + reverse proxy + SSL so the Chrysopedia web UI is accessible at https://chrysopedia.com. Simultaneously, add per-stage LLM model routing so different pipeline stages can use chat vs thinking models, with think-tag stripping for reasoning model output.
+
+## Slice Overview
+| ID | Slice | Risk | Depends | Done | After this |
+|----|-------|------|---------|------|------------|
+| S01 | Domain Setup — DNS, Reverse Proxy, SSL | medium | — | ✅ | https://chrysopedia.com loads the Chrysopedia web UI with SSL |
+| S02 | Per-Stage LLM Model Routing + Think-Tag Stripping | low | — | ✅ | Pipeline stages use different models for mechanical (chat) vs reasoning (thinking) tasks; think-tag stripping handles reasoning model output |

.gsd/milestones/M003/M003-SUMMARY.md

@@ -0,0 +1,50 @@
+---
+id: M003
+title: "Domain + DNS + Per-Stage LLM Model Routing"
+status: complete
+completed_at: 2026-03-30T02:13:37.009Z
+key_decisions:
+  - D015: Subnet 172.32.0.0/24 for Chrysopedia network
+  - D016: Ollama container for embedding model
+  - nginx reverse proxy on nuc01 following XPLTD pattern
+  - Thinking modality appends JSON instructions to system prompt instead of response_format
+key_files:
+  - backend/config.py
+  - backend/pipeline/llm_client.py
+  - backend/pipeline/stages.py
+  - backend/tests/test_pipeline.py
+  - .env.example
+lessons_learned:
+  - XPLTD domain setup flow: AdGuard rewrite (10.0.0.9) → nginx on nuc01 (proxy to ub01:port) → certbot SSL
+  - AD DNS at 10.0.0.15/.16 may already have CNAME entries for domains — check before assuming manual setup needed
+  - AdGuard API for DNS rewrites: POST /control/rewrite/add with {domain, answer} JSON body
+  - Per-stage LLM config with getattr-based helper is cleaner than separate config classes
+---
+
+# M003: Domain + DNS + Per-Stage LLM Model Routing
+
+**chrysopedia.com live with SSL, plus per-stage LLM model routing with thinking modality support — 59 tests pass.**
+
+## What Happened
+
+M003 delivered two independent workstreams across 2 slices.\n\n**S01 — Domain Setup** configured chrysopedia.com end-to-end: added DNS rewrites in AdGuard (chrysopedia.com + www → 10.0.0.9), created nginx reverse proxy config on nuc01 (proxy_pass to 10.0.0.10:8096 with security headers and rate limiting), and obtained a Certbot SSL cert. The AD DNS already had a CNAME for chrysopedia.com → dyndns.xpltd.co → public IP. https://chrysopedia.com is live with HTTP/2.\n\n**S02 — Per-Stage LLM Model Routing** added independent model/modality configuration for each pipeline stage (2-5). The LLMClient now supports 'chat' modality (standard JSON mode) and 'thinking' modality (appends JSON instructions to system prompt, strips <think>...</think> tags from output). A _get_stage_config helper reads per-stage settings. All 59 tests pass including a new think-tag stripping test with 7 cases. Changes deployed to ub01.
+
+## Success Criteria Results
+
+### 1. https://chrysopedia.com loads with valid SSL ✅\ncurl -sI returns HTTP/2 200 with valid cert (expires 2026-06-28)\n\n### 2. Internal DNS resolves chrysopedia.com ✅\nnslookup chrysopedia.com 10.0.0.10 returns 10.0.0.9\n\n### 3. Per-stage model/modality independently configurable ✅\n8 Settings fields, _get_stage_config helper, all stages wired\n\n### 4. Think-tag stripping handles <think> blocks ✅\nstrip_think_tags() tested with 7 cases: single, multiline, multiple, passthrough, empty, special chars, think-only\n\n### 5. All tests pass with updated mocks + new test ✅\n59/59 pass in 140s
+
+## Definition of Done Results
+
+| # | Item | Met | Evidence |\n|---|------|-----|----------|\n| 1 | chrysopedia.com resolves via AdGuard | ✅ | nslookup chrysopedia.com 10.0.0.10 returns 10.0.0.9 |\n| 2 | nginx proxies to ub01:8096 with SSL | ✅ | curl -sI https://chrysopedia.com returns HTTP/2 200 |\n| 3 | https://chrysopedia.com loads web UI | ✅ | Returns valid HTML |\n| 4 | Per-stage config fields in Settings | ✅ | 8 fields: llm_stage{2-5}_model and llm_stage{2-5}_modality |\n| 5 | LLMClient modality-aware | ✅ | complete() accepts modality and model_override |\n| 6 | Think-tag stripping | ✅ | strip_think_tags() tested with 7 cases |\n| 7 | Stages pass per-stage config | ✅ | All 4 stages call _get_stage_config |\n| 8 | .env.example documents vars | ✅ | Per-stage model/modality vars documented |\n| 9 | All tests pass | ✅ | 59/59 pass |
+
+## Requirement Outcomes
+
+No requirement status changes. Infrastructure and pipeline improvement milestone.
+
+## Deviations
+
+www.chrysopedia.com not covered by SSL cert — missing external CNAME record. AD DNS already had chrysopedia.com → dyndns.xpltd.co CNAME pre-configured.
+
+## Follow-ups
+
+Add CNAME record for www.chrysopedia.com at Namecheap and re-run certbot. Consider adding per-stage model settings to the .env on ub01 once the thinking model availability is confirmed.

.gsd/milestones/M003/slices/S01/S01-PLAN.md

@@ -0,0 +1,12 @@
+# S01: Domain Setup — DNS, Reverse Proxy, SSL
+
+**Goal:** Add chrysopedia.com to AdGuard DNS, nginx reverse proxy on nuc01 with Certbot SSL
+**Demo:** After this: https://chrysopedia.com loads the Chrysopedia web UI with SSL
+
+## Tasks
+- [x] **T01: chrysopedia.com live with SSL — AdGuard DNS, nginx reverse proxy on nuc01, Certbot cert issued** — 1. Add chrysopedia.com and www.chrysopedia.com DNS rewrites to AdGuard on ub01 (pointing to 10.0.0.9)
+2. Create nginx server block for chrysopedia.com on nuc01 (proxy_pass to 10.0.0.10:8096)
+3. Run certbot for SSL cert (requires external A record)
+4. Verify https://chrysopedia.com loads
+  - Estimate: 10min
+  - Verify: ssh ub01 'curl -sI http://chrysopedia.com' | head -5

.gsd/milestones/M003/slices/S01/S01-SUMMARY.md

@@ -0,0 +1,70 @@
+---
+id: S01
+parent: M003
+milestone: M003
+provides:
+  - https://chrysopedia.com public endpoint with valid SSL
+requires:
+  []
+affects:
+  []
+key_files:
+  - (none)
+key_decisions:
+  - nginx config on nuc01 at /etc/nginx/sites-enabled/chrysopedia.com.conf
+  - SSL via certbot with auto-renewal
+patterns_established:
+  - XPLTD domain setup: AdGuard rewrite → 10.0.0.9, nginx on nuc01, certbot SSL
+observability_surfaces:
+  - https://chrysopedia.com/health — public health endpoint
+drill_down_paths:
+  - .gsd/milestones/M003/slices/S01/tasks/T01-SUMMARY.md
+duration: ""
+verification_result: passed
+completed_at: 2026-03-30T02:10:15.149Z
+blocker_discovered: false
+---
+
+# S01: Domain Setup — DNS, Reverse Proxy, SSL
+
+**chrysopedia.com live with AdGuard DNS, nginx reverse proxy, and Certbot SSL**
+
+## What Happened
+
+Configured chrysopedia.com end-to-end: AdGuard DNS rewrites (chrysopedia.com + www to 10.0.0.9), nginx reverse proxy on nuc01 (proxy_pass to 10.0.0.10:8096), and Certbot SSL cert. The AD DNS already had a CNAME for chrysopedia.com → dyndns.xpltd.co → public IP, so external access was pre-configured. https://chrysopedia.com is live with HTTP/2 and security headers.
+
+## Verification
+
+https://chrysopedia.com returns 200 with valid SSL, health endpoint accessible through domain
+
+## Requirements Advanced
+
+None.
+
+## Requirements Validated
+
+None.
+
+## New Requirements Surfaced
+
+None.
+
+## Requirements Invalidated or Re-scoped
+
+None.
+
+## Deviations
+
+www.chrysopedia.com skipped from SSL cert due to missing external CNAME.
+
+## Known Limitations
+
+www.chrysopedia.com not covered by SSL cert — needs external CNAME record.
+
+## Follow-ups
+
+Add CNAME record for www.chrysopedia.com at Namecheap and re-run certbot to include www.
+
+## Files Created/Modified
+
+None.

.gsd/milestones/M003/slices/S01/S01-UAT.md

@@ -0,0 +1,6 @@
+# S01: Domain Setup — DNS, Reverse Proxy, SSL — UAT
+
+**Milestone:** M003
+**Written:** 2026-03-30T02:10:15.149Z
+
+## UAT: S01 — Domain Setup\n\n- [x] AdGuard DNS resolves chrysopedia.com to 10.0.0.9\n- [x] nginx on nuc01 proxies chrysopedia.com to ub01:8096\n- [x] Certbot SSL cert issued for chrysopedia.com\n- [x] https://chrysopedia.com returns HTTP/2 200\n- [x] /health endpoint returns ok through domain\n- [ ] www.chrysopedia.com SSL cert (needs external CNAME record)

.gsd/milestones/M003/slices/S01/tasks/T01-PLAN.md

@@ -0,0 +1,26 @@
+---
+estimated_steps: 4
+estimated_files: 3
+skills_used: []
+---
+
+# T01: Configure AdGuard DNS + nginx reverse proxy + Certbot SSL
+
+1. Add chrysopedia.com and www.chrysopedia.com DNS rewrites to AdGuard on ub01 (pointing to 10.0.0.9)
+2. Create nginx server block for chrysopedia.com on nuc01 (proxy_pass to 10.0.0.10:8096)
+3. Run certbot for SSL cert (requires external A record)
+4. Verify https://chrysopedia.com loads
+
+## Inputs
+
+- None specified.
+
+## Expected Output
+
+- `AdGuard DNS rewrite entries`
+- `nginx config on nuc01`
+- `SSL cert from Certbot`
+
+## Verification
+
+ssh ub01 'curl -sI http://chrysopedia.com' | head -5

.gsd/milestones/M003/slices/S01/tasks/T01-SUMMARY.md

@@ -0,0 +1,77 @@
+---
+id: T01
+parent: S01
+milestone: M003
+provides: []
+requires: []
+affects: []
+key_files: []
+key_decisions: ["SSL cert for chrysopedia.com only (no www — missing external DNS record)", "nginx config follows restraintmusic.com pattern with security headers and rate limiting"]
+patterns_established: []
+drill_down_paths: []
+observability_surfaces: []
+duration: ""
+verification_result: "curl -sI https://chrysopedia.com returns HTTP/2 200 with valid SSL, health endpoint returns ok"
+completed_at: 2026-03-30T02:09:58.028Z
+blocker_discovered: false
+---
+
+# T01: chrysopedia.com live with SSL — AdGuard DNS, nginx reverse proxy on nuc01, Certbot cert issued
+
+> chrysopedia.com live with SSL — AdGuard DNS, nginx reverse proxy on nuc01, Certbot cert issued
+
+## What Happened
+---
+id: T01
+parent: S01
+milestone: M003
+key_files:
+  - (none)
+key_decisions:
+  - SSL cert for chrysopedia.com only (no www — missing external DNS record)
+  - nginx config follows restraintmusic.com pattern with security headers and rate limiting
+duration: ""
+verification_result: passed
+completed_at: 2026-03-30T02:09:58.028Z
+blocker_discovered: false
+---
+
+# T01: chrysopedia.com live with SSL — AdGuard DNS, nginx reverse proxy on nuc01, Certbot cert issued
+
+**chrysopedia.com live with SSL — AdGuard DNS, nginx reverse proxy on nuc01, Certbot cert issued**
+
+## What Happened
+
+Added chrysopedia.com and www.chrysopedia.com DNS rewrites to AdGuard via API (pointing to 10.0.0.9). Created nginx reverse proxy config on nuc01 following the restraintmusic.com pattern (proxy_pass to 10.0.0.10:8096, security headers, rate limiting). Ran certbot for SSL — cert issued for chrysopedia.com (www.chrysopedia.com skipped due to missing external DNS). Verified https://chrysopedia.com returns 200 with valid SSL from both internal (ub01) and external (public IP) access.
+
+## Verification
+
+curl -sI https://chrysopedia.com returns HTTP/2 200 with valid SSL, health endpoint returns ok
+
+## Verification Evidence
+
+| # | Command | Exit Code | Verdict | Duration |
+|---|---------|-----------|---------|----------|
+| 1 | `curl -sI https://chrysopedia.com --resolve chrysopedia.com:443:149.76.193.34 | head -5` | 0 | ✅ pass — HTTP/2 200 | 500ms |
+| 2 | `curl -s https://chrysopedia.com/health --resolve chrysopedia.com:443:149.76.193.34` | 0 | ✅ pass — {status:ok, database:connected} | 400ms |
+| 3 | `ssh ub01 'nslookup chrysopedia.com 10.0.0.10'` | 0 | ✅ pass — resolves to 10.0.0.9 | 300ms |
+
+
+## Deviations
+
+www.chrysopedia.com doesn't have an external DNS record so certbot was run for chrysopedia.com only (without www). The AD DNS already had a CNAME for chrysopedia.com → dyndns.xpltd.co, so external DNS was pre-configured.
+
+## Known Issues
+
+www.chrysopedia.com doesn't have an external CNAME/A record — certbot couldn't issue cert for it. Needs a CNAME from www.chrysopedia.com to chrysopedia.com at the registrar.
+
+## Files Created/Modified
+
+None.
+
+
+## Deviations
+www.chrysopedia.com doesn't have an external DNS record so certbot was run for chrysopedia.com only (without www). The AD DNS already had a CNAME for chrysopedia.com → dyndns.xpltd.co, so external DNS was pre-configured.
+
+## Known Issues
+www.chrysopedia.com doesn't have an external CNAME/A record — certbot couldn't issue cert for it. Needs a CNAME from www.chrysopedia.com to chrysopedia.com at the registrar.

.gsd/milestones/M003/slices/S02/S02-PLAN.md

@@ -0,0 +1,35 @@
+# S02: Per-Stage LLM Model Routing + Think-Tag Stripping
+
+**Goal:** Add per-stage LLM model/modality routing with think-tag stripping to the pipeline
+**Demo:** After this: Pipeline stages use different models for mechanical (chat) vs reasoning (thinking) tasks; think-tag stripping handles reasoning model output
+
+## Tasks
+- [x] **T01: Added per-stage LLM model/modality config fields to Settings and _get_stage_config helper** — 1. Add 8 per-stage fields to Settings: llm_stage{2-5}_model (Optional[str], default None) and llm_stage{2-5}_modality (str, default 'chat')
+2. Add _get_stage_config(stage_num) helper to stages.py
+3. Update .env.example with new vars and comments
+4. Verify Settings loads correctly with and without stage-specific vars
+  - Estimate: 10min
+  - Files: backend/config.py, backend/pipeline/stages.py, .env.example
+  - Verify: cd backend && python3 -c "from config import Settings; s = Settings(); print(s.llm_stage2_model, s.llm_stage2_modality)"
+- [x] **T02: LLMClient now supports chat/thinking modality with model override and think-tag stripping** — 1. Add strip_think_tags(text) utility function that removes <think>...</think> blocks
+2. Handle multiline, multiple blocks, and no-block passthrough
+3. Add modality parameter to LLMClient.complete() with model_override
+4. For 'thinking' modality: skip response_format json_object, append JSON instructions to system prompt, strip think tags from response
+5. For 'chat' modality: keep current behavior
+6. Use model_override if provided, otherwise fall back to settings default
+  - Estimate: 15min
+  - Files: backend/pipeline/llm_client.py
+  - Verify: cd backend && python3 -c "from pipeline.llm_client import strip_think_tags; assert strip_think_tags('<think>reasoning</think>{\"a\": 1}') == '{\"a\": 1}'; print('PASS')"
+- [x] **T03: All 4 pipeline stages now use per-stage model/modality config with INFO logging** — 1. Update each stage (2-5) to call _get_stage_config and pass modality + model_override to llm.complete()
+2. Add INFO log line at start of each stage showing which model/modality is being used
+3. Update _safe_parse_llm_response to pass modality through
+  - Estimate: 10min
+  - Files: backend/pipeline/stages.py
+  - Verify: cd backend && python3 -c "from pipeline.stages import _get_stage_config; m, mod = _get_stage_config(2); print(f'model={m}, modality={mod}')"
+- [x] **T04: All 59 tests pass — existing mocks compatible, new think-tag stripping test added** — 1. Update _patch_llm_completions to handle new complete() signature (modality, model_override kwargs)
+2. Update test_llm_fallback to account for new parameters
+3. Add test_strip_think_tags with cases: single block, multiline, multiple blocks, no blocks, empty string
+4. Run full test suite to verify nothing breaks
+  - Estimate: 10min
+  - Files: backend/tests/test_pipeline.py
+  - Verify: cd backend && python3 -m pytest tests/test_pipeline.py -v --tb=short 2>&1 | tail -20

.gsd/milestones/M003/slices/S02/S02-SUMMARY.md

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+---
+id: S02
+parent: M003
+milestone: M003
+provides:
+  - Per-stage LLM model/modality routing
+  - strip_think_tags() utility for reasoning model output
+requires:
+  []
+affects:
+  []
+key_files:
+  - backend/config.py
+  - backend/pipeline/llm_client.py
+  - backend/pipeline/stages.py
+  - backend/tests/test_pipeline.py
+  - .env.example
+key_decisions:
+  - Per-stage config via Settings fields with getattr-based helper
+  - Thinking modality appends JSON instructions to system prompt (no response_format)
+  - strip_think_tags uses re.DOTALL regex
+patterns_established:
+  - Per-stage config pattern: Settings fields + _get_stage_config helper with getattr
+  - Modality-aware LLM client: chat (response_format) vs thinking (prompt instructions + tag stripping)
+observability_surfaces:
+  - INFO log per stage showing model and modality used
+  - INFO log per LLM request showing model, modality, response_model
+drill_down_paths:
+  - .gsd/milestones/M003/slices/S02/tasks/T01-SUMMARY.md
+  - .gsd/milestones/M003/slices/S02/tasks/T02-SUMMARY.md
+  - .gsd/milestones/M003/slices/S02/tasks/T03-SUMMARY.md
+  - .gsd/milestones/M003/slices/S02/tasks/T04-SUMMARY.md
+duration: ""
+verification_result: passed
+completed_at: 2026-03-30T02:12:55.741Z
+blocker_discovered: false
+---
+
+# S02: Per-Stage LLM Model Routing + Think-Tag Stripping
+
+**Per-stage LLM model/modality routing with think-tag stripping — 59 tests pass**
+
+## What Happened
+
+Implemented per-stage LLM model routing across 4 tasks. Each pipeline stage (2-5) can now independently configure which model and modality (chat vs thinking) to use. The LLMClient handles modality differences: chat uses response_format json_object, thinking appends JSON instructions and strips <think> tags. All 59 tests pass including the new think-tag stripping test.
+
+## Verification
+
+59/59 tests pass, imports work, config defaults correct
+
+## Requirements Advanced
+
+None.
+
+## Requirements Validated
+
+None.
+
+## New Requirements Surfaced
+
+None.
+
+## Requirements Invalidated or Re-scoped
+
+None.
+
+## Deviations
+
+None.
+
+## Known Limitations
+
+None.
+
+## Follow-ups
+
+None.
+
+## Files Created/Modified
+
+- `backend/config.py` — Added 8 per-stage model/modality config fields
+- `backend/pipeline/llm_client.py` — Modality-aware complete() with strip_think_tags()
+- `backend/pipeline/stages.py` — Stages 2-5 use _get_stage_config, pass modality/model_override
+- `backend/tests/test_pipeline.py` — Added test_strip_think_tags with 7 cases
+- `.env.example` — Documented per-stage LLM vars with modality comments

.gsd/milestones/M003/slices/S02/S02-UAT.md

@@ -0,0 +1,6 @@
+# S02: Per-Stage LLM Model Routing + Think-Tag Stripping — UAT
+
+**Milestone:** M003
+**Written:** 2026-03-30T02:12:55.741Z
+
+## UAT: S02 — Per-Stage LLM Model Routing\n\n- [x] Settings has 8 per-stage fields (llm_stage{2-5}_model and llm_stage{2-5}_modality)\n- [x] LLMClient.complete() accepts modality and model_override\n- [x] Thinking modality skips response_format, appends JSON instructions, strips think tags\n- [x] strip_think_tags handles single, multiline, multiple, empty, and no-tag cases\n- [x] All 4 stages (2-5) call _get_stage_config and pass config to LLM client\n- [x] .env.example documents per-stage vars\n- [x] All 59 tests pass

.gsd/milestones/M003/slices/S02/tasks/T01-PLAN.md

@@ -0,0 +1,26 @@
+---
+estimated_steps: 4
+estimated_files: 3
+skills_used: []
+---
+
+# T01: Add per-stage model config fields and stage config helper
+
+1. Add 8 per-stage fields to Settings: llm_stage{2-5}_model (Optional[str], default None) and llm_stage{2-5}_modality (str, default 'chat')
+2. Add _get_stage_config(stage_num) helper to stages.py
+3. Update .env.example with new vars and comments
+4. Verify Settings loads correctly with and without stage-specific vars
+
+## Inputs
+
+- `backend/config.py`
+
+## Expected Output
+
+- `backend/config.py (updated)`
+- `backend/pipeline/stages.py (_get_stage_config helper)`
+- `.env.example (updated)`
+
+## Verification
+
+cd backend && python3 -c "from config import Settings; s = Settings(); print(s.llm_stage2_model, s.llm_stage2_modality)"

.gsd/milestones/M003/slices/S02/tasks/T01-SUMMARY.md

@@ -0,0 +1,78 @@
+---
+id: T01
+parent: S02
+milestone: M003
+provides: []
+requires: []
+affects: []
+key_files: ["backend/config.py", "backend/pipeline/stages.py", ".env.example"]
+key_decisions: ["8 new Settings fields: llm_stage{2-5}_model (Optional[str]) and llm_stage{2-5}_modality (str, default 'chat')"]
+patterns_established: []
+drill_down_paths: []
+observability_surfaces: []
+duration: ""
+verification_result: "Settings loads with default values (model=None, modality=chat)"
+completed_at: 2026-03-30T01:46:57.859Z
+blocker_discovered: false
+---
+
+# T01: Added per-stage LLM model/modality config fields to Settings and _get_stage_config helper
+
+> Added per-stage LLM model/modality config fields to Settings and _get_stage_config helper
+
+## What Happened
+---
+id: T01
+parent: S02
+milestone: M003
+key_files:
+  - backend/config.py
+  - backend/pipeline/stages.py
+  - .env.example
+key_decisions:
+  - 8 new Settings fields: llm_stage{2-5}_model (Optional[str]) and llm_stage{2-5}_modality (str, default 'chat')
+duration: ""
+verification_result: passed
+completed_at: 2026-03-30T01:46:57.859Z
+blocker_discovered: false
+---
+
+# T01: Added per-stage LLM model/modality config fields to Settings and _get_stage_config helper
+
+**Added per-stage LLM model/modality config fields to Settings and _get_stage_config helper**
+
+## What Happened
+
+Added 8 per-stage config fields to Settings (model override + modality for stages 2-5), added _get_stage_config helper to stages.py, updated .env.example with commented examples showing recommended model assignments.
+
+## Verification
+
+Settings loads with default values (model=None, modality=chat)
+
+## Verification Evidence
+
+| # | Command | Exit Code | Verdict | Duration |
+|---|---------|-----------|---------|----------|
+| 1 | `cd backend && python3 -c "from config import Settings; s = Settings(); print(s.llm_stage2_model, s.llm_stage2_modality)"` | 0 | ✅ pass — None chat | 300ms |
+
+
+## Deviations
+
+None.
+
+## Known Issues
+
+None.
+
+## Files Created/Modified
+
+- `backend/config.py`
+- `backend/pipeline/stages.py`
+- `.env.example`
+
+
+## Deviations
+None.
+
+## Known Issues
+None.

.gsd/milestones/M003/slices/S02/tasks/T02-PLAN.md

@@ -0,0 +1,26 @@
+---
+estimated_steps: 6
+estimated_files: 1
+skills_used: []
+---
+
+# T02: Modality-aware LLMClient with think-tag stripping
+
+1. Add strip_think_tags(text) utility function that removes <think>...</think> blocks
+2. Handle multiline, multiple blocks, and no-block passthrough
+3. Add modality parameter to LLMClient.complete() with model_override
+4. For 'thinking' modality: skip response_format json_object, append JSON instructions to system prompt, strip think tags from response
+5. For 'chat' modality: keep current behavior
+6. Use model_override if provided, otherwise fall back to settings default
+
+## Inputs
+
+- `backend/pipeline/llm_client.py`
+
+## Expected Output
+
+- `backend/pipeline/llm_client.py (updated)`
+
+## Verification
+
+cd backend && python3 -c "from pipeline.llm_client import strip_think_tags; assert strip_think_tags('<think>reasoning</think>{\"a\": 1}') == '{\"a\": 1}'; print('PASS')"

.gsd/milestones/M003/slices/S02/tasks/T02-SUMMARY.md

@@ -0,0 +1,76 @@
+---
+id: T02
+parent: S02
+milestone: M003
+provides: []
+requires: []
+affects: []
+key_files: ["backend/pipeline/llm_client.py"]
+key_decisions: ["strip_think_tags uses re.DOTALL regex for multiline support", "Thinking modality appends JSON instructions to system prompt instead of using response_format", "INFO log on every LLM request shows model, modality, and response_model"]
+patterns_established: []
+drill_down_paths: []
+observability_surfaces: []
+duration: ""
+verification_result: "strip_think_tags passes all 5 test cases"
+completed_at: 2026-03-30T01:47:59.356Z
+blocker_discovered: false
+---
+
+# T02: LLMClient now supports chat/thinking modality with model override and think-tag stripping
+
+> LLMClient now supports chat/thinking modality with model override and think-tag stripping
+
+## What Happened
+---
+id: T02
+parent: S02
+milestone: M003
+key_files:
+  - backend/pipeline/llm_client.py
+key_decisions:
+  - strip_think_tags uses re.DOTALL regex for multiline support
+  - Thinking modality appends JSON instructions to system prompt instead of using response_format
+  - INFO log on every LLM request shows model, modality, and response_model
+duration: ""
+verification_result: passed
+completed_at: 2026-03-30T01:47:59.356Z
+blocker_discovered: false
+---
+
+# T02: LLMClient now supports chat/thinking modality with model override and think-tag stripping
+
+**LLMClient now supports chat/thinking modality with model override and think-tag stripping**
+
+## What Happened
+
+Rewrote LLMClient.complete() to accept modality ('chat'/'thinking') and model_override parameters. Chat modality preserves current behavior (response_format json_object). Thinking modality skips response_format, appends JSON instructions to system prompt, and strips <think>...</think> blocks from output. Added strip_think_tags() utility with regex-based stripping. All 5 test cases pass (single block, multiline, multiple blocks, no tags, empty).
+
+## Verification
+
+strip_think_tags passes all 5 test cases
+
+## Verification Evidence
+
+| # | Command | Exit Code | Verdict | Duration |
+|---|---------|-----------|---------|----------|
+| 1 | `cd backend && python3 -c "from pipeline.llm_client import strip_think_tags; ...assert tests..."` | 0 | ✅ pass — ALL PASS | 250ms |
+
+
+## Deviations
+
+None.
+
+## Known Issues
+
+None.
+
+## Files Created/Modified
+
+- `backend/pipeline/llm_client.py`
+
+
+## Deviations
+None.
+
+## Known Issues
+None.

.gsd/milestones/M003/slices/S02/tasks/T03-PLAN.md

@@ -0,0 +1,24 @@
+---
+estimated_steps: 3
+estimated_files: 1
+skills_used: []
+---
+
+# T03: Wire per-stage config into pipeline stage tasks
+
+1. Update each stage (2-5) to call _get_stage_config and pass modality + model_override to llm.complete()
+2. Add INFO log line at start of each stage showing which model/modality is being used
+3. Update _safe_parse_llm_response to pass modality through
+
+## Inputs
+
+- `backend/pipeline/stages.py`
+- `backend/config.py`
+
+## Expected Output
+
+- `backend/pipeline/stages.py (updated)`
+
+## Verification
+
+cd backend && python3 -c "from pipeline.stages import _get_stage_config; m, mod = _get_stage_config(2); print(f'model={m}, modality={mod}')"

.gsd/milestones/M003/slices/S02/tasks/T03-SUMMARY.md

@@ -0,0 +1,74 @@
+---
+id: T03
+parent: S02
+milestone: M003
+provides: []
+requires: []
+affects: []
+key_files: ["backend/pipeline/stages.py"]
+key_decisions: ["_safe_parse_llm_response passes modality/model_override through to retry calls"]
+patterns_established: []
+drill_down_paths: []
+observability_surfaces: []
+duration: ""
+verification_result: "_get_stage_config imports and returns correct defaults"
+completed_at: 2026-03-30T01:49:35.292Z
+blocker_discovered: false
+---
+
+# T03: All 4 pipeline stages now use per-stage model/modality config with INFO logging
+
+> All 4 pipeline stages now use per-stage model/modality config with INFO logging
+
+## What Happened
+---
+id: T03
+parent: S02
+milestone: M003
+key_files:
+  - backend/pipeline/stages.py
+key_decisions:
+  - _safe_parse_llm_response passes modality/model_override through to retry calls
+duration: ""
+verification_result: passed
+completed_at: 2026-03-30T01:49:35.293Z
+blocker_discovered: false
+---
+
+# T03: All 4 pipeline stages now use per-stage model/modality config with INFO logging
+
+**All 4 pipeline stages now use per-stage model/modality config with INFO logging**
+
+## What Happened
+
+Updated all 4 pipeline stages (2-5) to call _get_stage_config and pass modality + model_override to llm.complete(). Each stage now logs which model/modality it's using at INFO level. Updated _safe_parse_llm_response to pass modality/model_override through to the retry call.
+
+## Verification
+
+_get_stage_config imports and returns correct defaults
+
+## Verification Evidence
+
+| # | Command | Exit Code | Verdict | Duration |
+|---|---------|-----------|---------|----------|
+| 1 | `cd backend && python3 -c "from pipeline.stages import _get_stage_config; m, mod = _get_stage_config(2); print(f'model={m}, modality={mod}')"` | 0 | ✅ pass — model=None, modality=chat | 300ms |
+
+
+## Deviations
+
+None.
+
+## Known Issues
+
+None.
+
+## Files Created/Modified
+
+- `backend/pipeline/stages.py`
+
+
+## Deviations
+None.
+
+## Known Issues
+None.

.gsd/milestones/M003/slices/S02/tasks/T04-PLAN.md

@@ -0,0 +1,24 @@
+---
+estimated_steps: 4
+estimated_files: 1
+skills_used: []
+---
+
+# T04: Update tests and add think-tag stripping test
+
+1. Update _patch_llm_completions to handle new complete() signature (modality, model_override kwargs)
+2. Update test_llm_fallback to account for new parameters
+3. Add test_strip_think_tags with cases: single block, multiline, multiple blocks, no blocks, empty string
+4. Run full test suite to verify nothing breaks
+
+## Inputs
+
+- `backend/tests/test_pipeline.py`
+
+## Expected Output
+
+- `backend/tests/test_pipeline.py (updated)`
+
+## Verification
+
+cd backend && python3 -m pytest tests/test_pipeline.py -v --tb=short 2>&1 | tail -20

.gsd/milestones/M003/slices/S02/tasks/T04-SUMMARY.md

@@ -0,0 +1,74 @@
+---
+id: T04
+parent: S02
+milestone: M003
+provides: []
+requires: []
+affects: []
+key_files: ["backend/tests/test_pipeline.py"]
+key_decisions: ["Existing test mocks work unchanged — new params are internal to LLMClient.complete()"]
+patterns_established: []
+drill_down_paths: []
+observability_surfaces: []
+duration: ""
+verification_result: "59/59 tests pass including new think-tag stripping test"
+completed_at: 2026-03-30T02:12:34.810Z
+blocker_discovered: false
+---
+
+# T04: All 59 tests pass — existing mocks compatible, new think-tag stripping test added
+
+> All 59 tests pass — existing mocks compatible, new think-tag stripping test added
+
+## What Happened
+---
+id: T04
+parent: S02
+milestone: M003
+key_files:
+  - backend/tests/test_pipeline.py
+key_decisions:
+  - Existing test mocks work unchanged — new params are internal to LLMClient.complete()
+duration: ""
+verification_result: passed
+completed_at: 2026-03-30T02:12:34.810Z
+blocker_discovered: false
+---
+
+# T04: All 59 tests pass — existing mocks compatible, new think-tag stripping test added
+
+**All 59 tests pass — existing mocks compatible, new think-tag stripping test added**
+
+## What Happened
+
+Added test_strip_think_tags with 7 test cases (single block, multiline, multiple blocks, passthrough, empty, special characters, think-only). All 59 tests pass (6 ingest + 11 pipeline + 5 search + 13 public API + 24 review).
+
+## Verification
+
+59/59 tests pass including new think-tag stripping test
+
+## Verification Evidence
+
+| # | Command | Exit Code | Verdict | Duration |
+|---|---------|-----------|---------|----------|
+| 1 | `cd backend && python3 -m pytest tests/ -v --tb=short` | 0 | ✅ pass — 59 passed in 140.24s | 140240ms |
+
+
+## Deviations
+
+None.
+
+## Known Issues
+
+None.
+
+## Files Created/Modified
+
+- `backend/tests/test_pipeline.py`
+
+
+## Deviations
+None.
+
+## Known Issues
+None.

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